MirGeneDB 2.1
MirGeneDB ID

Aca-Mir-19-P2c

Family name MIR-19 (all species)
Seed GUGCAAA
Species Green anole lizard (Anolis carolinensis)
MiRBase ID
Paralogues Aca-Mir-19-P1a  Aca-Mir-19-P2a 
Orthologues Ami-Mir-19-P2c  Bta-Mir-19-P2c  Cfa-Mir-19-P2c  Cli-Mir-19-P2c  Cmi-Mir-19-P2c  Cpi-Mir-19-P2c  Cpo-Mir-19-P2c  Dno-Mir-19-P2c  Dre-Mir-19-P2c  Ete-Mir-19-P2c  Gga-Mir-19-P2c  Gja-Mir-19-P2c  Gmo-Mir-19-P2c  Hsa-Mir-19-P2c  Lch-Mir-19-P2c  Mdo-Mir-19-P2c  Mml-Mir-19-P2c  Mmu-Mir-19-P2c  Mun-Mir-19-P2c  Oan-Mir-19-P2c  Ocu-Mir-19-P2c  Pbv-Mir-19-P2c  Rno-Mir-19-P2c  Sha-Mir-19-P2c  Spt-Mir-19-P2c  Sto-Mir-19-P2c  Tgu-Mir-19-P2c  Xla-Mir-19-P2c3  Xla-Mir-19-P2c4  Xtr-Mir-19-P2c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(anoCar2)		 GL344214.1: 24242-24302 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-19-P2c)		 Mir-17-P2c GL344214.1: 22479-22543 [+] UCSC Ensembl
Mir-17-P4c GL344214.1: 24042-24104 [+] UCSC Ensembl
Mir-92-P1c GL344214.1: 24446-24508 [+] UCSC Ensembl
Mir-92-P2c GL344214.1: 24606-24670 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACAGACAGACCUUUGUGCUGAUCUACAGUCCGUUUUGCAGGUUUGCAUCCCAGCUUGCUGUCCGUCGCUGUGCAAAUCCAUGCAAAACUGACUGUGGUGGUAGUUGUGAGCGGUAAAGGAU
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Structure
        10         20         30         40         50        60
ACAGACAGACCUUUGUG-   AU-        C        -  -|     UCC    UUGCU 
                  CUG   CUACAGUC GUUUUGCA GG UUUGCA   CAGC     G
                  GAU   GGUGUCAG CAAAACGU CC AAACGU   GUCG     U
UAGGAAAUGGCGAGUGUU   GGU        U        A  U^     ---    CUGCC 
 .       110       100        90        80           70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Sk To Wh
Star sequence

Aca-Mir-19-P2c_5p*
mirBase accessionNone
Sequence 
0- CGUUUUGCAGGUUUGCAUCCCAGC -24
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Mature sequence

Aca-Mir-19-P2c_3p
mirBase accessionNone
Sequence 
38- UGUGCAAAUCCAUGCAAAACUGA -61
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