MirGeneDB 3.0
MirGeneDB ID

Ami-Mir-19-P2c

Family name MIR-19 (all species)
Seed GUGCAAA
Species American alligator (Alligator mississippiensis)
MiRBase ID
Paralogues Ami-Mir-19-P1a  Ami-Mir-19-P2a 
Orthologues Aca-Mir-19-P2c  Bta-Mir-19-P2c  Cfa-Mir-19-P2c  Cja-Mir-19-P2c  Cli-Mir-19-P2c  Cmi-Mir-19-P2c  Cpi-Mir-19-P2c  Cpo-Mir-19-P2c  Dno-Mir-19-P2c  Dre-Mir-19-P2c  Eca-Mir-19-P2c  Ete-Mir-19-P2c  Gga-Mir-19-P2c  Gja-Mir-19-P2c  Gmo-Mir-19-P2c  Hsa-Mir-19-P2c  Laf-Mir-19-P2c  Lch-Mir-19-P2c  Mdo-Mir-19-P2c  Mml-Mir-19-P2c  Mmr-Mir-19-P2c  Mmu-Mir-19-P2c  Mun-Mir-19-P2c  Neu-Mir-19-P2c  Oan-Mir-19-P2c  Ocu-Mir-19-P2c  Pab-Mir-19-P2c  Pbv-Mir-19-P2c  Rno-Mir-19-P2c  Sha-Mir-19-P2c  Spt-Mir-19-P2c  Sto-Mir-19-P2c  Tgu-Mir-19-P2c  Xla-Mir-19-P2c3  Xla-Mir-19-P2c4  Xtr-Mir-19-P2c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCF_000281125.3_ASM28112v4_AMI_add)		 NW_017711293.1: 2599868-2599927 [-] UCSC
Precursor
(pre-Mir +30nt flank)
UCUUGGAAGAAAGCAGUGCUGCUUACAGUCAGUUUUGCAGGUUUGCAUCCCAGCUUAUAUCCAUUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGUGGUGGUGAAUCCGUUGUGGACGA
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Structure
        10           20        30         40         50          
UCUUGGAAGAAAGCAGU---  UG U                -  -|     UCC    UUAUA 
                    GC  C UACAGUCAGUUUUGCA GG UUUGCA   CAGC     \
                    UG  G GUGUCAGUCAAAACGU CC AAACGU   GUCG     U
AGCAGGUGUUGCCUAAGUGG  GU -                A  U^     ---    UUACC 
.       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
To
Star sequence

Ami-Mir-19-P2c_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGUUUUGCAGGUUUGCAUCCCAGC -24
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Mature sequence

Ami-Mir-19-P2c_3p
mirBase accessionNone
Sequence 
37- UGUGCAAAUCCAUGCAAAACUGA -60
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