MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-19-P2c

Family name MIR-19 (all species)
Seed GUGCAAA
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-19-P1a  Laf-Mir-19-P2a 
Orthologues Aca-Mir-19-P2c  Ami-Mir-19-P2c  Bta-Mir-19-P2c  Cfa-Mir-19-P2c  Cja-Mir-19-P2c  Cli-Mir-19-P2c  Cmi-Mir-19-P2c  Cpi-Mir-19-P2c  Cpo-Mir-19-P2c  Dno-Mir-19-P2c  Dre-Mir-19-P2c  Eca-Mir-19-P2c  Ete-Mir-19-P2c  Gga-Mir-19-P2c  Gja-Mir-19-P2c  Gmo-Mir-19-P2c  Hsa-Mir-19-P2c  Lch-Mir-19-P2c  Mdo-Mir-19-P2c  Mml-Mir-19-P2c  Mmr-Mir-19-P2c  Mmu-Mir-19-P2c  Mun-Mir-19-P2c  Neu-Mir-19-P2c  Oan-Mir-19-P2c  Ocu-Mir-19-P2c  Pab-Mir-19-P2c  Pbv-Mir-19-P2c  Rno-Mir-19-P2c  Sha-Mir-19-P2c  Spt-Mir-19-P2c  Sto-Mir-19-P2c  Tgu-Mir-19-P2c  Xla-Mir-19-P2c3  Xla-Mir-19-P2c4  Xtr-Mir-19-P2c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010127.1: 4183925-4183984 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAAUAUUCCAAGACACUGCUCAUUACAGUUAGUUUUGCAGGUUUGCAUUGCAGUAUAUGUAUAUGGCUGUGCAAAUCCAUGCAAAACUGACGGUGAUGGUGCGUGCUGUCUUCGUCCUUG
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Structure
        10          20        30         40         50        
GAAUAUUCCAAGACACU-  -       A            -  -|      U  AGUAUA 
                  GC UCAUUAC GUUAGUUUUGCA GG UUUGCAU GC      U
                  CG GGUAGUG CAGUCAAAACGU CC AAACGUG CG      G
GUUCCUGCUUCUGUCGUG  U       G            A  U^      U  GUAUAU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
-   +
Wh
Star sequence

Laf-Mir-19-P2c_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGUUUUGCAGGUUUGCAUUGCAGU -24
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Mature sequence

Laf-Mir-19-P2c_3p
mirBase accessionNone
Sequence 
37- UGUGCAAAUCCAUGCAAAACUGA -60
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