MirGeneDB ID | Neu-Mir-19-P2c |
---|---|
Family name | MIR-19 (all species) |
Seed | GUGCAAA |
Species | Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID | |
Paralogues | Neu-Mir-19-P1a |
Orthologues | Aca-Mir-19-P2c Ami-Mir-19-P2c Bta-Mir-19-P2c Cfa-Mir-19-P2c Cja-Mir-19-P2c Cli-Mir-19-P2c Cmi-Mir-19-P2c Cpi-Mir-19-P2c Cpo-Mir-19-P2c Dno-Mir-19-P2c Dre-Mir-19-P2c Eca-Mir-19-P2c Ete-Mir-19-P2c Gga-Mir-19-P2c Gja-Mir-19-P2c Gmo-Mir-19-P2c Hsa-Mir-19-P2c Laf-Mir-19-P2c Lch-Mir-19-P2c Mdo-Mir-19-P2c Mml-Mir-19-P2c Mmr-Mir-19-P2c Mmu-Mir-19-P2c Mun-Mir-19-P2c Oan-Mir-19-P2c Ocu-Mir-19-P2c Pab-Mir-19-P2c Pbv-Mir-19-P2c Rno-Mir-19-P2c Sha-Mir-19-P2c Spt-Mir-19-P2c Sto-Mir-19-P2c Tgu-Mir-19-P2c Xla-Mir-19-P2c3 Xla-Mir-19-P2c4 Xtr-Mir-19-P2c |
Node of Origin (locus) | Gnathostomata |
Node of Origin (family) | Vertebrata |
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 56056827-56056885 [-] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | CUAGCAUUAAUCCCGGGGCUACUCACAGUCAGUUUUGCAGGUCUUGCAUCGGCCUAUGUCGAUUGCUGUGCAAAUCCAUGCAAAACUGAUUAUGAGGGCGUUUGCAACUGCAGUUUUCGGet precursor sequence |
Structure | 10 20 30 40 50 CUAGCAUUAAUCCCGGG---| A C - UC U CUAUG GCU CUCA AGUCAGUUUUGCA GG UUGCA CGGC \ CGG GAGU UUAGUCAAAACGU CC AACGU GUCG U GCUUUUGACGUCAACGUUUG^ - A A UA - UUAGC 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | No |
Motifs | CNNC at 3p(+17) |
Star sequence | Neu-Mir-19-P2c_5p* (predicted) |
mirBase accession | None |
Sequence |
0- AGUUUUGCAGGUCUUGCAUCGGC -23
Get sequence
|
Mature sequence | Neu-Mir-19-P2c_3p |
mirBase accession | None |
Sequence |
36- UGUGCAAAUCCAUGCAAAACUGA -59
Get sequence
|