MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-27-P1

Family name MIR-27 (all species)
Seed UCACAGU
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID
Paralogues Tni-Mir-27-P2b  Tni-Mir-27-P3  Tni-Mir-27-P4a  Tni-Mir-27-P4b 
Orthologues Dre-Mir-27-P1  Gmo-Mir-27-P1  Lch-Mir-27-P1  Loc-Mir-27-P1  Mal-Mir-27-P1  Pma-Mir-27-o1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 15_random: 3094204-3094266 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGUGUGUGUCCUGAGUUUGAGAGAGGGGCAGGACUUGGCUCGCUCCGUGAACAGUUCGGUCAGUGUGAGUGUUCACAGUGGCUAAGUUCCGCUCCUCACAAGCUUUACCAGCGUCCCACCUC
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Structure
        10        20          30        40        50        60  
GUGUGUGUGUCCUGAGUUUGAGA--|      A         U    CC       GUUCGGU 
                         GAGGGGC GGACUUGGC CGCU  GUGAACA       C
                         CUCCUCG CUUGAAUCG GUGA  CACUUGU       A
CUCCACCCUGCGACCAUUUCGAACA^      C         -    --       GAGUGUG 
 120       110       100        90         80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sp Sp Sp To
Star sequence

Tni-Mir-27-P1_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGACUUGGCUCGCUCCGUGAACA -24
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Mature sequence

Tni-Mir-27-P1_3p
mirBase accessionNone
Sequence 
42- UUCACAGUGGCUAAGUUCCGC -63
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