MirGeneDB 3.0
MirGeneDB ID

Tur-Mir-2-o143

Family name MIR-2 (all species)
Seed AUCACAG
Species Two-spotted spider mite (Tetranychus urticae)
MiRBase ID
Paralogues Tur-Mir-2-o142a  Tur-Mir-2-o142b 
Orthologues Gsp-Mir-2  Pca-Mir-2-o143  Ple-Mir-2 
Node of Origin (locus) T. urticae
Node of Origin (family) Protostomia
Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces)		 HE587302.1: 3261040-3261110 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CAAAACUGGUGUAAUUUGCAUUCAUCUGGGUCGUCAAAGAGGCUGUGAAAUGUAAAUAUUGUUUUGCUUAAUAACUCAUAUCACAGCCAGCUUUGAUGAUUUUGGUAAAAUGCAGUGCUCAUCAUCACCGU
Get precursor sequence
Structure
        10         20         30        40         50        60    
CAAAACUGGUGUAAUUU-     C-   UG           A-|       A   UAAAUAUUGUU 
                  GCAUU  AUC  GGUCGUCAAAG  GGCUGUGA AUG           U
                  CGUAA  UGG  UUAGUAGUUUC  CCGACACU UAC           U
UGCCACUACUACUCGUGA     AA   UU           GA^       A   UCAAUAAUUCG 
 .       120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Ad Ad Ad Ad Ad Em To
Star sequence

Tur-Mir-2-o143_5p*
mirBase accessionNone
Sequence 
0- UCGUCAAAGAGGCUGUGAAAUG -22
Get sequence
Mature sequence

Tur-Mir-2-o143_3p
mirBase accessionNone
Sequence 
48- UAUCACAGCCAGCUUUGAUGAUU -71
Get sequence