MirGeneDB 3.0
MirGeneDB ID

War-Mir-2-o95

Family name MIR-2 (all species)
Seed AUCACAG
Species Wirenia (Solenogaster) (Wirenia argentea)
MiRBase ID
Paralogues War-Mir-2-P12  War-Mir-2-o93  War-Mir-2-o94  War-Mir-2-o96  War-Mir-2-o97  War-Mir-2-o98  War-Mir-2-o99 
Orthologues Gsp-Mir-2  Ple-Mir-2 
Node of Origin (locus) W. argentea
Node of Origin (family) Protostomia
Genome context
(GCA_025802215.1_ASM2580221v1_Wirenia)		 WNLI01003363.1: 17073-17130 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGUCUGUUCUUUGAUAAUCUGACUGUCUGGCCAUCAAAGUGGUUGUGAUGUGCUCUCGACUGUCAUAUCACAGCCAGCUUUGAUGAGCCAGCUUGUCAGGUAGACAACUUGCUGAGAG
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Structure
        10         20        30          40        50        
UGUCUGUUCUUUGAUAA-      UGU     -        -|            CUCUC 
                  UCUGAC   CUGGC CAUCAAAG UGGUUGUGAUGUG     \
                  GGACUG   GACCG GUAGUUUC ACCGACACUAUAC     G
GAGAGUCGUUCAACAGAU      UUC     A        G^            UGUCA 
      110       100        90        80        70        60
Deep sequencing
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CommentIt is not clear either from phylogenetic or syntenic information how many Mir-2 genes were present in the last common ancestor of protostomes and how the multiple paralogues in lophotrochozoans relate to the four Mir-2 genes in arthropods. Thus all lophotrochozoan genes aside from Mir-2-P12 are classified as orphans pending further data and analysis.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
So
Star sequence

War-Mir-2-o95_5p* (predicted)
mirBase accessionNone
Sequence 
0- CCAUCAAAGUGGUUGUGAUGUG -22
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Mature sequence

War-Mir-2-o95_3p
mirBase accessionNone
Sequence 
35- UAUCACAGCCAGCUUUGAUGAGC -58
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