MirGeneDB 3.0
MirGeneDB ID

War-Mir-2-o96

Family name MIR-2 (all species)
Seed AUCACAG
Species Wirenia (Solenogaster) (Wirenia argentea)
MiRBase ID
Paralogues War-Mir-2-P12  War-Mir-2-o93  War-Mir-2-o94  War-Mir-2-o95  War-Mir-2-o97  War-Mir-2-o98  War-Mir-2-o99 
Orthologues Gsp-Mir-2  Ple-Mir-2 
Node of Origin (locus) W. argentea
Node of Origin (family) Protostomia
Genome context
(GCA_025802215.1_ASM2580221v1_Wirenia)		 WNLI01003363.1: 17457-17517 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAUGUGACAUUUCAUGACGUGUCAACCAGCCGUUAAAGUUGCUAUGAUGUGUUGAUGUAUUACGUCAUAUCACAGCUAGCUUUGACGAGCUGGAUUGUCACAAAUUCAACAUUGACUAAG
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Structure
        10        20         30         40         50         
AAAUGUGACAUUUCAUGAC   U   -     -          -|  A       UUGAUG 
                   GUG CAA CCAGC CGUUAAAGUU GCU UGAUGUG      U
                   CAC GUU GGUCG GCAGUUUCGA CGA ACUAUAC      A
GAAUCAGUUACAACUUAAA   U   A     A          U^  C       UGCAUU 
 .       110       100        90        80        70        60
Deep sequencing
CommentIt is not clear either from phylogenetic or syntenic information how many Mir-2 genes were present in the last common ancestor of protostomes and how the multiple paralogues in lophotrochozoans relate to the four Mir-2 genes in arthropods. Thus all lophotrochozoan genes aside from Mir-2-P12 are classified as orphans pending further data and analysis.
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
So
Star sequence

War-Mir-2-o96_5p* (predicted)
mirBase accessionNone
Sequence 
0- CCGUUAAAGUUGCUAUGAUGUG -22
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Mature sequence

War-Mir-2-o96_3p (predicted)
mirBase accessionNone
Sequence 
38- UAUCACAGCUAGCUUUGACGAGC -61
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