MirGeneDB 3.0
MirGeneDB ID

War-Mir-2-o99

Family name MIR-2 (all species)
Seed AUCACAG
Species Wirenia (Solenogaster) (Wirenia argentea)
MiRBase ID
Paralogues War-Mir-2-P12  War-Mir-2-o93  War-Mir-2-o94  War-Mir-2-o95  War-Mir-2-o96  War-Mir-2-o97  War-Mir-2-o98 
Orthologues Gsp-Mir-2  Ple-Mir-2 
Node of Origin (locus) W. argentea
Node of Origin (family) Protostomia
Genome context
(GCA_025802215.1_ASM2580221v1_Wirenia)		 WNLI01082317.1: 2162-2221 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGUCAGCGAUGCCAAUUUUGGUCUUUAUUCCCAUUCAAGUGACUGUGAUGUGUUCCUAUAGCAACCAUAUCACAGUCUGCUUUGAUGAGCAUAUGACUAAUAACACAUCACGUUUGACAA
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Structure
        10           20        30        40         50         
UGUCAGCGAUGCCAAUU---|     UU   UCC    C    -            UUCCUA 
                    UUGGUC  UAU   CAUU AAGU GACUGUGAUGUG      \
                    AAUCAG  AUA   GUAG UUCG CUGACACUAUAC      U
AACAGUUUGCACUACACAAU^     U-   CGA    U    U            CAACGA 
.       110       100         90        80        70        60
Deep sequencing
CommentIt is not clear either from phylogenetic or syntenic information how many Mir-2 genes were present in the last common ancestor of protostomes and how the multiple paralogues in lophotrochozoans relate to the four Mir-2 genes in arthropods. Thus all lophotrochozoan genes aside from Mir-2-P12 are classified as orphans pending further data and analysis.
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
So
Star sequence

War-Mir-2-o99_5p* (predicted)
mirBase accessionNone
Sequence 
0- CCAUUCAAGUGACUGUGAUGUGU -23
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Mature sequence

War-Mir-2-o99_3p (predicted)
mirBase accessionNone
Sequence 
37- UAUCACAGUCUGCUUUGAUGAGC -60
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