MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-1662-P2

Family name MIR-1662 (all species)
Seed UGACAUC
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-1662-P1 
Orthologues Aca-Mir-1662  Ami-Mir-1662  Cli-Mir-1662  Cpi-Mir-1662  Gga-Mir-1662  Mun-Mir-1662  Spt-Mir-1662  Tgu-Mir-1662  Xtr-Mir-1662 
Node of Origin (locus) X. laevis
Node of Origin (family) Tetrapoda
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030735.1: 5595665-5595722 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGUCGUCGUGCACAGCUGCGUUCUAUGGGUUUGACAUCAUCAUACUUGGGAUGUAUAACACAAAGUCCCAAGCAAGCUGAUGUUAGGCCCAAGAUGGCUGCCAUCCUGUCUCGCUAAA
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Structure
        10           20        30        40        50        
GGUCGUCGUGCACAGCU---| GU   A              UCAUA        GUAUA 
                    GC  UCU UGGGUUUGACAUCA     CUUGGGAU     A
                    CG  AGA ACCCGGAUUGUAGU     GAACCCUG     C
AAAUCGCUCUGUCCUACCGU^ GU   -              CGAAC        AAACA 
      110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Eg Em Em He Ki Re St St
Mature sequence

Xla-Mir-1662-P2_5p
mirBase accessionNone
Sequence 
0- UUGACAUCAUCAUACUUGGGAU -22
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Star sequence

Xla-Mir-1662-P2_3p*
mirBase accessionNone
Sequence 
36- CCCAAGCAAGCUGAUGUUAGGC -58
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