MirGeneDB 3.0
MirGeneDB ID

Cpi-Mir-1662

Family name MIR-1662 (all species)
Seed UGACAUC
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-1662
Paralogues
Orthologues Aca-Mir-1662  Ami-Mir-1662  Cli-Mir-1662  Gga-Mir-1662  Gja-Mir-1662-P3  Gja-Mir-1662-P4  Mun-Mir-1662  Spt-Mir-1662  Tgu-Mir-1662  Xla-Mir-1662-P1  Xla-Mir-1662-P2  Xtr-Mir-1662 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(chrPic1)		 JH584507: 4701911-4701968 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGACGUCGUGCAGAGCUGUGCUCUAUGGGUUUGACAUCAUCAUACUUGAGAUGUAUGACACAAAGUCCCAAGCAGGCUGAUGUCAGGCCCAAGAUGGCUGCCAUUCUGUCUCGGUUUA
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Structure
        10           20        30         40        50        
GGACGUCGUGCAGAGCU---| GC   A              -  AUA    A   GUAUG 
                    GU  UCU UGGGUUUGACAUCA UC   CUUG GAU     A
                    CG  AGA ACCCGGACUGUAGU GG   GAAC CUG     C
AUUUGGCUCUGUCUUACCGU^ GU   -              C  AC-    C   AAACA 
      110       100         90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
-   +
Te Te Te To
Mature sequence

Cpi-Mir-1662_5p
mirBase accessionMIMAT0037918
Sequence 
0- UUGACAUCAUCAUACUUGAGAU -22
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Star sequence

Cpi-Mir-1662_3p*
mirBase accessionMIMAT0037919
Sequence 
36- CCCAAGCAGGCUGAUGUCAGGC -58
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