MirGeneDB 3.0

6 Monodelphis domestica microRNA genes with seed AGUGCAA (all species)
Sort by genome coordinates Motifs Tissue expression
 +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC Br Ce He Ki Te
Mdo-Mir-130-P1a mdo-mir-130c-2 MIR-130 AGUGCAA MIMAT0031110 MIMAT0028515 3 511102163 511102221 - Gnathostomata Vertebrata No 1
Mdo-Mir-130-P1b mdo-mir-130c-1 MIR-130 AGUGCAA MIMAT0028514 MIMAT0028515 2 172985794 172985856 + Gnathostomata Vertebrata No
Mdo-Mir-130-P1c mdo-mir-130a MIR-130 AGUGCAA MIMAT0026664 MIMAT0004106 5 291845609 291845670 + Gnathostomata Vertebrata Yes
Mdo-Mir-130-P2b mdo-mir-301 MIR-130 AGUGCAA MIMAT0026932 MIMAT0012739 2 172986787 172986848 + Gnathostomata Vertebrata No 1
Mdo-Mir-130-P3b None MIR-130 AGUGCAA None None 2 172999062 172999126 + Gnathostomata Vertebrata Unknown 1
Mdo-Mir-130-P4a mdo-mir-130b MIR-130 AGUGCAA MIMAT0028564 MIMAT0028565 3 511101361 511101418 - Gnathostomata Vertebrata Yes 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix