MirGeneDB 3.0
MirGeneDB ID

Bfl-Mir-193-P1o2

Family name MIR-193 (all species)
Seed ACUGGCU
Species Florida lancelet (Branchiostoma floridae)
MiRBase ID
Paralogues Bfl-Mir-193-P1e  Bfl-Mir-193-P1j  Bfl-Mir-193-P1k  Bfl-Mir-193-P1o1a  Bfl-Mir-193-P1o1b 
Orthologues Aae-Mir-193-P1  Aga-Mir-193-P1  Bge-Mir-193-P1  Cbr-Mir-193-P1-v1  Cbr-Mir-193-P1-v2  Cel-Mir-193-P1-v1  Cel-Mir-193-P1-v2  Cte-Mir-193-P1  Dan-Mir-193-P1-v1  Dan-Mir-193-P1-v2  Dan-Mir-193-P1-v3  Dan-Mir-193-P1-v4  Dgr-Mir-193-P1  Dlo-Mir-193-P1  Dma-Mir-193-P1  Dme-Mir-193-P1-v1  Dme-Mir-193-P1-v2  Dme-Mir-193-P1-v3  Dme-Mir-193-P1-v4  Dmo-Mir-193-P1-v1  Dmo-Mir-193-P1-v2  Dmo-Mir-193-P1-v3  Dmo-Mir-193-P1-v4  Dpu-Mir-193-P1  Dsi-Mir-193-P1-v1  Dsi-Mir-193-P1-v2  Dsi-Mir-193-P1-v3  Dsi-Mir-193-P1-v4  Dya-Mir-193-P1-v1  Dya-Mir-193-P1-v2  Dya-Mir-193-P1-v3  Dya-Mir-193-P1-v4  Eba-Mir-193-P1  Efe-Mir-193-P1o  Esc-Mir-193-P1  Gpa-Mir-193-P1  Hme-Mir-193-P1  Hru-Mir-193-P1  Isc-Mir-193-P1  Lgi-Mir-193-P1  Lhy-Mir-193-P1  Mgi-Mir-193-P1  Mom-Mir-193-P1  Npo-Mir-193-P1  Obi-Mir-193-P1  Ofu-Mir-193-P1  Ovu-Mir-193-P1  Pau-Mir-193-P1  Pcr-Mir-193-P1  Pma-Mir-193-P1  Pmi-Mir-193-P1  Pve-Mir-193-P1  Rph-Mir-193-P1  Snu-Mir-193-P1  Tca-Mir-193-P1  War-Mir-193-P1  Xbo-Mir-193-P1 
Node of Origin (locus) B. floridae
Node of Origin (family) Bilateria
Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic)		 NC_049982.1: 12293365-12293425 [+] UCSC
Precursor
(pre-Mir +30nt flank)
GUUUAACAAAACAUGCUCACCGUUACCGACCGGGGCCUCGUGAGUCAGACGGUUCUAUAUAUCGUAUCCUACUGGCUCUCAAAGUCCUGAUCGGCUGCGGUGACUUUCCGACAGUGUGCUG
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Structure
        10          20        30        40        50          
GUUUAACAAAACAUGCU--|     UA    C      CUCGU       AC  UUCUAUA 
                   CACCGU  CCGA CGGGGC     GAGUCAG  GG       \
                   GUGGCG  GGCU GUCCUG     CUCGGUC  CC       U
GUCGUGUGACAGCCUUUCA^     UC    A      AAACU       AU  UAUGCUA 
 .       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Bfl-Mir-193-P1o2_5p* (predicted)
mirBase accessionNone
Sequence 
0- CGGGGCCUCGUGAGUCAGACGG -22
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Mature sequence

Bfl-Mir-193-P1o2_3p (predicted)
mirBase accessionNone
Sequence 
39- UACUGGCUCUCAAAGUCCUGAU -61
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