MirGeneDB 3.0
MirGeneDB ID

Bla-Mir-12494-P2b

Family name MIR-12494 (all species)
Seed GGCCUAG
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues Bla-Mir-12494-P1  Bla-Mir-12494-P2a  Bla-Mir-12494-P3  Bla-Mir-12494-P4  Bla-Mir-12494-P5 
Orthologues Bfl-Mir-12494 
Node of Origin (locus) B. lanceolatum
Node of Origin (family) Branchiostoma
Genome context
(BraLan2)		 Sc0000025: 2401852-2401911 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GGUUCGAGAGAAAUCCGGGUUACUACAUAAAUCCGUGGUGAUUAUGGCCAUGUUGUUUAUCAGGUCUCAUGGCCUAGUUUCCUCGGAUUUCUGUUAAACCUUUCGUCAGCGACAUAGAAU
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Structure
        10           20        30        40        50          
GGUUCGAGAGAAAUCCG---|   ACU   U       U  U     U       UUGUUUA 
                    GGUU   ACA AAAUCCG GG GAUUA GGCCAUG       \
                    CCAA   UGU UUUAGGC CC UUGAU CCGGUAC       U
UAAGAUACAGCGACUGCUUU^   AU-   C       U  U     -       UCUGGAC 
.       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Em Em Em Em
Star sequence

Bla-Mir-12494-P2b_5p*
mirBase accessionNone
Sequence 
0- AUCCGUGGUGAUUAUGGCCAUG -22
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Mature sequence

Bla-Mir-12494-P2b_3p
mirBase accessionNone
Sequence 
39- UGGCCUAGUUUCCUCGGAUUU -60
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