| MirGeneDB ID | Bta-Mir-1911 |
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| Family name |
MIR-1911 (all species) |
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| Seed |
GAGUACC |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Cfa-Mir-1911
Cja-Mir-1911
Eca-Mir-1911
Hsa-Mir-1911
Mml-Mir-1911
Mmr-Mir-1911
Ocu-Mir-1911
Pab-Mir-1911
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037357.1: 63096211-63096269 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AGUAUCCAUCAUCAUAUGCUGGGCAUCUGCUGAGUACCGCCAUGUCUGUUGGGAAUCCACAAUCUCCCACCAGGCAUUGUGGUCUCUGCUGAUGCUCUGCCAUUUCAUCACCAGUGCCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AGUAUCCAUCAUCAUAU--| U U U U C U AAUCC
GC GGGCAUC GC GAG ACCGC AUGUCUG UGGG A
CG CUCGUAG CG CUC UGGUG UACGGAC ACCC C
UCCGUGACCACUACUUUAC^ U U U - U C UCUAA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Mature sequence |
Bta-Mir-1911_5p |
| mirBase accession | None |
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| Sequence |
0- UGAGUACCGCCAUGUCUGUUGGG -23
Get sequence
|
|---|
| Star sequence |
Bta-Mir-1911_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- CACCAGGCAUUGUGGUCUCUGC -59
Get sequence
|
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