MirGeneDB ID | Bta-Mir-2355 |
Family name |
MIR-2355 (all species) |
Seed |
UCCCCAG |
Species |
Cow (Bos taurus) |
MiRBase ID |
bta-mir-2355
|
Paralogues |
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Orthologues |
Cfa-Mir-2355
Cja-Mir-2355
Cpo-Mir-2355
Dno-Mir-2355
Ete-Mir-2355
Hsa-Mir-2355
Laf-Mir-2355
Mml-Mir-2355
Mmr-Mir-2355
Ocu-Mir-2355
Pab-Mir-2355
|
Node of Origin (locus) |
Eutheria
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Node of Origin (family) |
Eutheria
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Genome context (GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037329.1: 95400111-95400177 [-]
UCSC
Ensembl
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Precursor (pre-Mir +30nt flank) |
UGCAUAGAAAAUAACAUUGUCAGAUGUGUCAUCCCCAGAUACAAUGGACAAUAUGCUAUUAUAAUUGUGUGGCAUUGUCCUUGCUGUUUGGAGAUAAUACUGCUGACAUUAUUCCUCUCAUACAUGU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UGCAUAGAAAAUAACAU-- AU C C -| U AU UAUUAUA
UGUCAG GUGU AUC CCAGAUA CAA GGACA AUGC \
ACAGUC CAUA UAG GGUUUGU GUU CCUGU UACG A
UGUACAUACUCUCCUUAUU GU A A C^ - -- GUGUGUU
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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Mature sequence |
Bta-Mir-2355_5p |
mirBase accession | MIMAT0011891 |
Sequence |
0- AUCCCCAGAUACAAUGGACAAUAUGC -26
Get sequence
|
Proposed targets |
TargetScanVert: bta-miR-2355-5p
|
Star sequence |
Bta-Mir-2355_3p* |
mirBase accession | MIMAT0011892 |
Sequence |
43- AUUGUCCUUGCUGUUUGGAGAUAA -67
Get sequence
|
Proposed targets |
TargetScanVert: bta-miR-2355-3p
|