MirGeneDB 3.0

MirGeneDB ID

Bta-Mir-2355

Family name MIR-2355 (all species)
Seed UCCCCAG
Species Cow (Bos taurus)
MiRBase ID bta-mir-2355
Paralogues
Orthologues Cfa-Mir-2355  Cja-Mir-2355  Cpo-Mir-2355  Dno-Mir-2355  Ete-Mir-2355  Hsa-Mir-2355  Laf-Mir-2355  Mml-Mir-2355  Mmr-Mir-2355  Ocu-Mir-2355  Pab-Mir-2355 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037329.1: 95400111-95400177 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCAUAGAAAAUAACAUUGUCAGAUGUGUCAUCCCCAGAUACAAUGGACAAUAUGCUAUUAUAAUUGUGUGGCAUUGUCCUUGCUGUUUGGAGAUAAUACUGCUGACAUUAUUCCUCUCAUACAUGU
Get precursor sequence
Structure
        10          20        30        40         50        60    
UGCAUAGAAAAUAACAU--      AU    C   C       -|  U     AU    UAUUAUA 
                   UGUCAG  GUGU AUC CCAGAUA CAA GGACA  AUGC       \
                   ACAGUC  CAUA UAG GGUUUGU GUU CCUGU  UACG       A
UGUACAUACUCUCCUUAUU      GU    A   A       C^  -     --    GUGUGUU 
     120       110       100        90         80          70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-2355_5p

mirBase accessionMIMAT0011891
Sequence
0- AUCCCCAGAUACAAUGGACAAUAUGC -26
Get sequence
Proposed targets TargetScanVert: bta-miR-2355-5p
Star sequence

Bta-Mir-2355_3p*

mirBase accessionMIMAT0011892
Sequence
43- AUUGUCCUUGCUGUUUGGAGAUAA -67
Get sequence
Proposed targets TargetScanVert: bta-miR-2355-3p