| MirGeneDB ID | Cja-Mir-2355 |
|---|---|
| Family name | MIR-2355 (all species) |
| Seed | UCCCCAG |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-2355 Cfa-Mir-2355 Cpo-Mir-2355 Dno-Mir-2355 Ete-Mir-2355 Hsa-Mir-2355 Laf-Mir-2355 Mml-Mir-2355 Mmr-Mir-2355 Ocu-Mir-2355 Pab-Mir-2355 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021920.1: 125017477-125017543 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UGCAUAGAAAAUAACAUUGUCAGACGUGUCAUCCCCAGAUACAAUGGACAAUAUGCUAUUAUAAUUGUAUGGCAUUGUCCUUGCUGUUUGGAGAUAAUACUGCUGACUUUAUUCCUCUCAUACAUGUGet precursor sequence |
| Structure | 10 20 30 40 50 60 UGCAUAGAAAAUAACAUU-- AC C C -| U AUGCUAUUAU GUCAG GUGU AUC CCAGAUA CAA GGACAAU \ CAGUC CAUA UAG GGUUUGU GUU CCUGUUA A UGUACAUACUCUCCUUAUUU GU A A C^ - CGGUAUGUUA 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Cja-Mir-2355_5p |
| mirBase accession | None |
| Sequence |
0- AUCCCCAGAUACAAUGGACAAU -22
Get sequence
|
| Co-mature sequence | Cja-Mir-2355_3p (predicted) |
| mirBase accession | None |
| Sequence |
45- UGUCCUUGCUGUUUGGAGAUAA -67
Get sequence
|
