| MirGeneDB ID | Cfa-Mir-2355 |
|---|
| Family name |
MIR-2355 (all species) |
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| Seed |
UCCCCAG |
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| Species |
Dog (Canis familiaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Bta-Mir-2355
Cja-Mir-2355
Cpo-Mir-2355
Dno-Mir-2355
Ete-Mir-2355
Hsa-Mir-2355
Laf-Mir-2355
Mml-Mir-2355
Mmr-Mir-2355
Ocu-Mir-2355
Pab-Mir-2355
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
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Genome context
(canFam3_add) |
chr37: 15549132-15549198 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGCAUAGAAAAUAACAUUGUCAGACGUGUCAUCCCCAGAUACAAUGGACAAUAUGCUAUUAUAAUUGUAUGGCAUUGUCCUUGCUGUUUGGAGAUAAUACUGCUGACAUGAUUCCUCUCACACAUGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UGCAUAGAAAAUAACAU-- AC C C -| U AUGCUAUUAU
UGUCAG GUGU AUC CCAGAUA CAA GGACAAU \
ACAGUC CAUA UAG GGUUUGU GUU CCUGUUA A
UGUACACACUCUCCUUAGU GU A A C^ - CGGUAUGUUA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | There are Dicer cuts +1 and +2 on both arms. |
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
| An |
An |
An |
Bl |
Ce |
Co |
He |
Hi |
Hi |
Hy |
Ki |
Ki |
Li |
Lu |
Ov |
Sk |
Te |
Te |
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| Mature sequence |
Cfa-Mir-2355_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AUCCCCAGAUACAAUGGACAAU -22
Get sequence
|
|---|
| Star sequence |
Cfa-Mir-2355_3p* |
| mirBase accession | None |
|---|
| Sequence |
45- UGUCCUUGCUGUUUGGAGAUAA -67
Get sequence
|
|---|
