MirGeneDB 3.0

MirGeneDB ID

Ocu-Mir-2355

Family name MIR-2355 (all species)
Seed UCCCCAG
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-2355
Paralogues
Orthologues Bta-Mir-2355  Cfa-Mir-2355  Cja-Mir-2355  Cpo-Mir-2355  Dno-Mir-2355  Ete-Mir-2355  Hsa-Mir-2355  Laf-Mir-2355  Mml-Mir-2355  Mmr-Mir-2355  Pab-Mir-2355 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)
chr7: 147915972-147916038 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCAUAUAAAAUAACAUUGUCAGACAUGUCAUCCCCAGAUACAAUGGACAAUAUGCUAUUAUAAUUGUAUGGCAUUGUCCUUGCUGUUUGCAGAUAAUACUGCUGACAUUAUUCCUCUCAUACAUGU
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Structure
        10          20         30        40         50        60   
UGCAUAUAAAAUAACAU--      A  -   C   CC      -|  U       AUGCUAUUAU 
                   UGUCAG CA UGU AUC  CAGAUA CAA GGACAAU          \
                   ACAGUC GU AUA UAG  GUUUGU GUU CCUGUUA          A
UGUACAUACUCUCCUUAUU      -  C   A   AC      C^  -       CGGUAUGUUA 
     120       110        100        90         80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
He Ki Te To Wh
Mature sequence

Ocu-Mir-2355_5p (predicted)

mirBase accessionMIMAT0048603
Sequence
0- AUCCCCAGAUACAAUGGACAAU -22
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Co-mature sequence

Ocu-Mir-2355_3p (predicted)

mirBase accessionMIMAT0048604
Sequence
45- UGUCCUUGCUGUUUGCAGAUAA -67
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