| MirGeneDB ID | Laf-Mir-2355 |
|---|---|
| Family name | MIR-2355 (all species) |
| Seed | UCCCCAG |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-2355 Cfa-Mir-2355 Cja-Mir-2355 Cpo-Mir-2355 Dno-Mir-2355 Ete-Mir-2355 Hsa-Mir-2355 Mml-Mir-2355 Mmr-Mir-2355 Ocu-Mir-2355 Pab-Mir-2355 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010030.1: 19547200-19547265 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UGCAUAGAAAAUAACAUUGUCAGACGUGUCAUCCCCAGAUACAAUGGACAAUAUGCUAUUAUAAUUGUGUGGUAUUGUCCUUGGUUUAGGAGAUAAUAUUACUGACAUUAUUCCUCUCAUACAUGUGet precursor sequence |
| Structure | 10 20 30 40 50 60 UGCAUAGAAAAUAACAU-- AC C -| C A U AUGCUAUUAU UGUCAG GUGU AUC CC AGAU CAA GGACAAU \ ACAGUC UAUA UAG GG UUUG GUU CCUGUUA A UGUACAUACUCUCCUUAUU AU A A^ A - - UGGUGUGUUA 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Laf-Mir-2355_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- AUCCCCAGAUACAAUGGACAAU -22
Get sequence
|
| Star sequence | Laf-Mir-2355_3p* (predicted) |
| mirBase accession | None |
| Sequence |
45- UGUCCUUGGUUUAGGAGAUAA -66
Get sequence
|
