| MirGeneDB ID | Bta-Mir-708 |
|---|
| Family name |
MIR-708 (all species) |
|---|
| Seed |
AGGAGCU |
|---|
| Species |
Cow (Bos taurus) |
|---|
| MiRBase ID |
bta-mir-708
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Cfa-Mir-708
Cja-Mir-708
Cpo-Mir-708
Dno-Mir-708
Eca-Mir-708
Ete-Mir-708
Hsa-Mir-708
Laf-Mir-708
Mml-Mir-708
Mmr-Mir-708
Mmu-Mir-708
Ocu-Mir-708
Pab-Mir-708
Rno-Mir-708
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037356.1: 16596088-16596156 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
ACUGCUGUGUGUGAAGUGGUAACUGCCCUCAAGGAGCUUACAAUCUAGCUGGGGGUAAACGACUUGCACAUGAACGCAUCUAGACUGUGAGCUUCUAGAGGGCAGGGACCUUACCCUAAGUCAUCUCUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
ACUGCUGUGUGUGAAGU--| AA A A C GGGGUAAACGAC
GGU CUGCCCUC AGGAGCUUACA UCUAG UG \
CCA GACGGGAG UCUUCGAGUGU AGAUC AC U
CUCUCUACUGAAUCCCAUU^ GG A C U GCAAGUACACGU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14) |
|---|
Tissue expression
|
| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Bta-Mir-708_5p |
| mirBase accession | MIMAT0009367 |
|---|
| Sequence |
0- AAGGAGCUUACAAUCUAGCUGGG -23
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: bta-miR-708
|
|---|
| Star sequence |
Bta-Mir-708_3p* |
| mirBase accession | None |
|---|
| Sequence |
46- CAUCUAGACUGUGAGCUUCUAGA -69
Get sequence
|
|---|
