MirGeneDB 3.0

MirGeneDB ID

Laf-Mir-708

Family name MIR-708 (all species)
Seed AGGAGCU
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-708  Cfa-Mir-708  Cja-Mir-708  Cpo-Mir-708  Dno-Mir-708  Eca-Mir-708  Ete-Mir-708  Hsa-Mir-708  Mml-Mir-708  Mmr-Mir-708  Mmu-Mir-708  Ocu-Mir-708  Pab-Mir-708  Rno-Mir-708 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)
GL010089.1: 2376149-2376217 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACUGCUGUGUGUGAAAUGGUGACUGCCCUCAAGGAGCUUACAAUCUAGCUGGGGGUAAAAGACUUGCACAUAAACGCAACUAGACUGUGAGCUUCUAGAGGGCAGGGACCUUACCCUAGUCAUCUCUCU
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Structure
        10          20        30        40        50        60    
ACUGCUGUGUGUGAAAU--|  GA        A           A     C  GGGGUAAAAGAC 
                   GGU  CUGCCCUC AGGAGCUUACA UCUAG UG            \
                   CCA  GACGGGAG UCUUCGAGUGU AGAUC AC            U
UCUCUCUACUGAUCCCAUU^  GG        A           C     A  GCAAAUACACGU 
       120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
 +
Wh
Mature sequence

Laf-Mir-708_5p

mirBase accessionNone
Sequence
0- AAGGAGCUUACAAUCUAGCUGGG -23
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Star sequence

Laf-Mir-708_3p* (predicted)

mirBase accessionNone
Sequence
46- CAACUAGACUGUGAGCUUCUAGA -69
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