| MirGeneDB ID | Eca-Mir-708 |
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| Family name |
MIR-708 (all species) |
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| Seed |
AGGAGCU |
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| Species |
Horse (Equus caballus) |
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| MiRBase ID |
eca-mir-708
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| Paralogues |
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| Orthologues |
Bta-Mir-708
Cfa-Mir-708
Cja-Mir-708
Cpo-Mir-708
Dno-Mir-708
Ete-Mir-708
Hsa-Mir-708
Laf-Mir-708
Mml-Mir-708
Mmr-Mir-708
Mmu-Mir-708
Ocu-Mir-708
Pab-Mir-708
Rno-Mir-708
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_002863925.1_EquCab3.0) |
CM009154.1: 67413086-67413154 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
ACUGCUGUGUGUGGAGUGGUAACUGCCCUCAAGGAGCUUACAAUCUAGCUGGGGGUAAAUGACUUGCACAUGAACGCAACUAGACUGUGAGCUUCUAGAGGGCAGGGGCCUUACCCUGGUCAUCUCUCU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
ACUGCUGUGUGUGGAGU--| AA A A C GGGGUAAAUGAC
GGU CUGCCCUC AGGAGCUUACA UCUAG UG \
CCG GACGGGAG UCUUCGAGUGU AGAUC AC U
UCUCUCUACUGGUCCCAUU^ GG A C A GCAAGUACACGU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14) |
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Tissue expression
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| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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| Mature sequence |
Eca-Mir-708_5p |
| mirBase accession | MIMAT0012993 |
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| Sequence |
0- AAGGAGCUUACAAUCUAGCUGGG -23
Get sequence
|
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| Star sequence |
Eca-Mir-708_3p* |
| mirBase accession | None |
|---|
| Sequence |
46- CAACUAGACUGUGAGCUUCUAGA -69
Get sequence
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