MirGeneDB ID | Hsa-Mir-708 |
---|---|
Family name | MIR-708 (all species) |
Seed | AGGAGCU |
Species | Human (Homo sapiens) |
MiRBase ID | hsa-mir-708 |
Paralogues | |
Orthologues | Bta-Mir-708 Cfa-Mir-708 Cja-Mir-708 Cpo-Mir-708 Dno-Mir-708 Eca-Mir-708 Ete-Mir-708 Laf-Mir-708 Mml-Mir-708 Mmr-Mir-708 Mmu-Mir-708 Ocu-Mir-708 Pab-Mir-708 Rno-Mir-708 |
Node of Origin (locus) | Eutheria |
Node of Origin (family) | Eutheria |
Genome context (hg38) |
chr11: 79402031-79402099 [-] UCSC Ensembl |
Clustered miRNAs (< 50kb from Mir-708) |
Mir-708
chr11: 79402031-79402099 [-]
UCSC
Ensembl
Mir-5579 chr11: 79422169-79422226 [-] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | ACUGCUGUGUGUGAAAUGGUAACUGCCCUCAAGGAGCUUACAAUCUAGCUGGGGGUAAAUGACUUGCACAUGAACACAACUAGACUGUGAGCUUCUAGAGGGCAGGGACCUUACCCUAGUCAUCUCUCUGet precursor sequence |
Structure | 10 20 30 40 50 60 ACUGCUGUGUGUGAAAU--| AA A A C GGGGUAAAUGAC GGU CUGCCCUC AGGAGCUUACA UCUAG UG \ CCA GACGGGAG UCUUCGAGUGU AGAUC AC U UCUCUCUACUGAUCCCAUU^ GG A C A ACAAGUACACGU 120 110 100 90 80 70 |
Deep sequencing | |
Comment | There is a second Dicer cut -1 on both arms. |
3' NTU | No |
Motifs | UG at 5p(-14) |
Mature sequence | Hsa-Mir-708_5p |
mirBase accession | MIMAT0004926 |
Sequence |
0- AAGGAGCUUACAAUCUAGCUGGG -23
Get sequence
|
Proposed targets |
microrna.org: MIMAT0004926 TargetScanVert: hsa-miR-708-5p TargetMiner: hsa-miR-708-5p miRDB: MIMAT0004926 |
Star sequence | Hsa-Mir-708_3p* |
mirBase accession | MIMAT0004927 |
Sequence |
46- CAACUAGACUGUGAGCUUCUAGA -69
Get sequence
|
Proposed targets |
microrna.org: MIMAT0004927 TargetScanVert: hsa-miR-708-3p TargetMiner: hsa-miR-708-3p miRDB: MIMAT0004927 |