| MirGeneDB ID | Cja-Mir-708 |
|---|---|
| Family name | MIR-708 (all species) |
| Seed | AGGAGCU |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-708 Cfa-Mir-708 Cpo-Mir-708 Dno-Mir-708 Eca-Mir-708 Ete-Mir-708 Hsa-Mir-708 Laf-Mir-708 Mml-Mir-708 Mmr-Mir-708 Mmu-Mir-708 Ocu-Mir-708 Pab-Mir-708 Rno-Mir-708 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021925.1: 57852958-57853026 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | ACUGCUGUGUGUGAAAUGGUAACUGCCCUCAAGGAGCUUACAAUCUAGCUGGGGGUAAAUGACUUGCACAUGAACACAACUAGACUGUGAGCUUCUAGAGGGCAGGGACCUUACCCUAGUCAUCUCUCUGet precursor sequence |
| Structure | 10 20 30 40 50 60 ACUGCUGUGUGUGAAAU--| AA A A C GGGGUAAAUGAC GGU CUGCCCUC AGGAGCUUACA UCUAG UG \ CCA GACGGGAG UCUUCGAGUGU AGAUC AC U UCUCUCUACUGAUCCCAUU^ GG A C A ACAAGUACACGU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14) |
| Mature sequence | Cja-Mir-708_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- AAGGAGCUUACAAUCUAGCUGGG -23
Get sequence
|
| Star sequence | Cja-Mir-708_3p* (predicted) |
| mirBase accession | None |
| Sequence |
46- CAACUAGACUGUGAGCUUCUAGA -69
Get sequence
|
