| MirGeneDB ID | Cpo-Mir-708 |
|---|
| Family name |
MIR-708 (all species) |
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| Seed |
AGGAGCU |
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| Species |
Guinea pig (Cavia porcellus) |
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| MiRBase ID |
cpo-mir-708
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-708
Cfa-Mir-708
Cja-Mir-708
Dno-Mir-708
Eca-Mir-708
Ete-Mir-708
Hsa-Mir-708
Laf-Mir-708
Mml-Mir-708
Mmr-Mir-708
Mmu-Mir-708
Ocu-Mir-708
Pab-Mir-708
Rno-Mir-708
|
|---|
| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(cavPor3) |
scaffold_40: 13990350-13990418 [+]
UCSC
|
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Precursor
(pre-Mir +30nt flank) |
ACAGCUGUGUGUGAAAUGGUAACUGCCCUCAAGGAGCUUACAAUCUAGCUGGGGGUAGAUGACUUGCACAUGAACACAACUAGACUGUGAGCUUCUAGAGGGCAGGGACCUUACCCUAGUCAUCUCUGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
ACAGCUGUGUGUGAAAU--| AA A A C GGGGUAGAUGAC
GGU CUGCCCUC AGGAGCUUACA UCUAG UG \
CCA GACGGGAG UCUUCGAGUGU AGAUC AC U
CGUCUCUACUGAUCCCAUU^ GG A C A ACAAGUACACGU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
No
|
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| Motifs | UG at 5p(-14) |
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Tissue expression
|
| Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
To |
| |
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| Mature sequence |
Cpo-Mir-708_5p |
| mirBase accession | MIMAT0047377 |
|---|
| Sequence |
0- AAGGAGCUUACAAUCUAGCUGGG -23
Get sequence
|
|---|
| Co-mature sequence |
Cpo-Mir-708_3p |
| mirBase accession | MIMAT0047378 |
|---|
| Sequence |
46- CAACUAGACUGUGAGCUUCUAGA -69
Get sequence
|
|---|
