MirGeneDB 3.0

MirGeneDB ID

Cfa-Mir-6529

Family name MIR-6529 (all species)
Seed AGAGAUC
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-6529
Paralogues
Orthologues Bta-Mir-6529  Cja-Mir-6529  Cpo-Mir-6529  Dno-Mir-6529  Eca-Mir-6529  Ete-Mir-6529  Hsa-Mir-6529  Laf-Mir-6529  Mml-Mir-6529  Mmr-Mir-6529  Ocu-Mir-6529  Pab-Mir-6529 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)
chr33: 23649328-23649388 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUAUCUUACAUGAGAAAAACCUGUUCUCUUGAGAGAUCAGAGGCGCAGAGUGCGUCAAUGUCAAUGAAGCCUGUGCCUUUUACCUCUUUAAGAGCGCACGGUUUCAUUCUGCUUCUAAACC
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Structure
        10         20         30         40        50          
AUAUCUUACAUGAGAAA-    -   U     -|    AUC          A  GCGUCAAU 
                  AACC UGU CUCUU GAGAG   AGAGGCGCAG GU        \
                  UUGG ACG GAGAA UUCUC   UUUCCGUGUC CG        G
CCAAAUCUUCGUCUUACU    C   C     U^    CAU          -  AAGUAACU 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-6529_5p

mirBase accessionNone
Sequence
0- GAGAGAUCAGAGGCGCAGAGU -21
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Star sequence

Cfa-Mir-6529_3p*

mirBase accessionMIMAT0034278
Sequence
39- CCUGUGCCUUUUACCUCUUUAA -61
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Proposed targets TargetScanVert: cfa-miR-6529
miRDB: MIMAT0034278