MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-6529

Family name MIR-6529 (all species)
Seed AGAGAUC
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-6529  Cfa-Mir-6529  Cpo-Mir-6529  Dno-Mir-6529  Eca-Mir-6529  Ete-Mir-6529  Hsa-Mir-6529  Laf-Mir-6529  Mml-Mir-6529  Mmr-Mir-6529  Ocu-Mir-6529  Pab-Mir-6529 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021929.1: 76756576-76756636 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AACAUCUUAGAUGAGAAAACCUGUUCUCUUGAGAGAUCAGAGGCGCAGAGUGCGUCAAUGUCAAUGAAGCCUGUGCCUUUUACCUCUUUAAGAGCGCACGGUUUCAUUCUGCUUCUAAAUC
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Structure
        10         20         30         40        50          
AACAUCUUAGAUGAGAA-    -   U     -|    AUC          A  GCGUCAAU 
                  AACC UGU CUCUU GAGAG   AGAGGCGCAG GU        \
                  UUGG ACG GAGAA UUCUC   UUUCCGUGUC CG        G
CUAAAUCUUCGUCUUACU    C   C     U^    CAU          -  AAGUAACU 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Cja-Mir-6529_5p
mirBase accessionNone
Sequence 
0- GAGAGAUCAGAGGCGCAGAGU -21
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Star sequence

Cja-Mir-6529_3p*
mirBase accessionNone
Sequence 
39- CCUGUGCCUUUUACCUCUUUAA -61
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