MirGeneDB ID | Hsa-Mir-6529 |
Family name |
MIR-6529 (all species) |
Seed |
AGAGAUC |
Species |
Human (Homo sapiens) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-6529
Cfa-Mir-6529
Cpo-Mir-6529
Dno-Mir-6529
Ete-Mir-6529
Mml-Mir-6529
Ocu-Mir-6529
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (hg38) |
chr3: 120084575-120084635 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AACAUCUUAGAUGAGAAAACCUGUUCUCUUGAGAGAUCAGAGGCGCAGAGUGCGUCAGUGUCAAUGAAGCCUGUGCCUUUUACUUCUUUAAGAGCGUACGGUUUCAUUCUGCUCCUAAAUC
Get precursor sequence
|
Structure | 10 20 30 40 50
AACAUCUUAGAUGAGAA- - UU -| AUC A GCGUCAGU
AACC UG CUCUU GAGAG AGAGGCGCAG GU \
UUGG AU GAGAA UUCUU UUUCCGUGUC CG G
CUAAAUCCUCGUCUUACU C GC U^ CAU - AAGUAACU
. 110 100 90 80 70 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
2- |
2- |
2- |
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2- |
2- |
2- |
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2- |
2- |
3- |
3- |
3- |
4- |
4- |
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4- |
4- |
4- |
4- |
4- |
4- |
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4- |
4- |
4- |
4- |
4- |
5- |
5- |
5- |
5- |
5- |
5- |
5- |
6- |
6- |
6- |
6- |
6- |
|
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|
Mature sequence |
Hsa-Mir-6529_5p |
mirBase accession | None |
Sequence |
0- GAGAGAUCAGAGGCGCAGAGU -21
Get sequence
|
Star sequence |
Hsa-Mir-6529_3p* (predicted) |
mirBase accession | None |
Sequence |
39- CCUGUGCCUUUUACUUCUUUAA -61
Get sequence
|