MirGeneDB ID | Hsa-Mir-6529 |
Family name |
MIR-6529 (all species) |
Seed |
AGAGAUC |
Species |
Human (Homo sapiens) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-6529
Cfa-Mir-6529
Cja-Mir-6529
Cpo-Mir-6529
Dno-Mir-6529
Eca-Mir-6529
Ete-Mir-6529
Laf-Mir-6529
Mml-Mir-6529
Mmr-Mir-6529
Ocu-Mir-6529
Pab-Mir-6529
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (hg38) |
chr3: 120084575-120084635 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AACAUCUUAGAUGAGAAAACCUGUUCUCUUGAGAGAUCAGAGGCGCAGAGUGCGUCAGUGUCAAUGAAGCCUGUGCCUUUUACUUCUUUAAGAGCGUACGGUUUCAUUCUGCUCCUAAAUC
Get precursor sequence
|
Structure | 10 20 30 40 50
AACAUCUUAGAUGAGAA- - UU -| AUC A GCGUCAGU
AACC UG CUCUU GAGAG AGAGGCGCAG GU \
UUGG AU GAGAA UUCUU UUUCCGUGUC CG G
CUAAAUCCUCGUCUUACU C GC U^ CAU - AAGUAACU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
Dc |
Dc |
Dr |
Dr |
Xp |
Xp |
Bl |
Br |
Br |
Ce |
Ce |
Co |
Fo |
He |
Ki |
Le |
Li |
Li |
Lu |
Pa |
Pl |
Pl |
Sk |
Sk |
Sk |
Sm |
Sp |
Sp |
St |
Te |
Th |
Ut |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Mature sequence |
Hsa-Mir-6529_5p |
mirBase accession | None |
Sequence |
0- GAGAGAUCAGAGGCGCAGAGU -21
Get sequence
|
Star sequence |
Hsa-Mir-6529_3p* (predicted) |
mirBase accession | None |
Sequence |
39- CCUGUGCCUUUUACUUCUUUAA -61
Get sequence
|