MirGeneDB ID | Mml-Mir-6529 |
Family name |
MIR-6529 (all species) |
Seed |
AGAGAUC |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-6529
|
Paralogues |
|
Orthologues |
Bta-Mir-6529
Cfa-Mir-6529
Cja-Mir-6529
Cpo-Mir-6529
Dno-Mir-6529
Eca-Mir-6529
Ete-Mir-6529
Hsa-Mir-6529
Laf-Mir-6529
Mmr-Mir-6529
Ocu-Mir-6529
Pab-Mir-6529
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014337.1: 156193505-156193565 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AACAUCUCAGAUGAGAAAACCUGUUCUCUUGAGAGAUCAGAGGCGCAGAGUGCGUCAAUGUCAAUGAAGCCUGUGCCUUUUACCUCUUUAAGAGCGUAUGGUUUCAUUCUGCUCCUAAAUC
Get precursor sequence
|
Structure | 10 20 30 40 50
AACAUCUCAGAUGAGAA- - UU -| AUC A GCGUCAAU
AACC UG CUCUU GAGAG AGAGGCGCAG GU \
UUGG AU GAGAA UUCUC UUUCCGUGUC CG G
CUAAAUCCUCGUCUUACU U GC U^ CAU - AAGUAACU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Mature sequence |
Mml-Mir-6529_5p |
mirBase accession | MIMAT0028314 |
Sequence |
0- GAGAGAUCAGAGGCGCAGAGU -21
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-6529-5p
|
Star sequence |
Mml-Mir-6529_3p* |
mirBase accession | MIMAT0028315 |
Sequence |
39- CCUGUGCCUUUUACCUCUUUAA -61
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-6529-3p
|