| MirGeneDB ID | Pab-Mir-6529 |
|---|---|
| Family name | MIR-6529 (all species) |
| Seed | AGAGAUC |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-6529 Cfa-Mir-6529 Cja-Mir-6529 Cpo-Mir-6529 Dno-Mir-6529 Eca-Mir-6529 Ete-Mir-6529 Hsa-Mir-6529 Laf-Mir-6529 Mml-Mir-6529 Mmr-Mir-6529 Ocu-Mir-6529 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM068843.1: 18027681-18027741 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AACAUCUUAGAUGAGAAAACCUGUUCUCUUGAGAGAUCAGAGGCGCAGAGUGCGUCAGUGUCAAUGAAGCCUGUGCCUUUUACCUCUUUAAGAGCGUACGGUUUCAUUCUGCUCCUAAAUCGet precursor sequence |
| Structure | 10 20 30 40 50 AACAUCUUAGAUGAGAA- - UU -| AUC A GCGUCAGU AACC UG CUCUU GAGAG AGAGGCGCAG GU \ UUGG AU GAGAA UUCUC UUUCCGUGUC CG G CUAAAUCCUCGUCUUACU C GC U^ CAU - AAGUAACU . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Pab-Mir-6529_5p |
| mirBase accession | None |
| Sequence |
0- GAGAGAUCAGAGGCGCAGAGU -21
Get sequence
|
| Star sequence | Pab-Mir-6529_3p* (predicted) |
| mirBase accession | None |
| Sequence |
39- CCUGUGCCUUUUACCUCUUUAA -61
Get sequence
|
