| MirGeneDB ID | Cja-Mir-105-P2 |
|---|---|
| Family name | MIR-105 (all species) |
| Seed | CAAAUGC |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-105-P1 |
| Orthologues | Bta-Mir-105-P2 Cfa-Mir-105-P2 Eca-Mir-105-P2 Hsa-Mir-105-P2 Mml-Mir-105-P2 Mmr-Mir-105-P2 Ocu-Mir-105-P2 Pab-Mir-105-P2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021937.1: 144013000-144013058 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UCUGUUGCAGAACCUGAGUGUGCAUCGUGGUCAAAUGCUCAGACUCCUGUGGUGGCUGUUCAUGCACCACGGAUGUUUGAGCAUGUGCUACGGUGUCUACUUUUGCUACAUUGCCGUCUGet precursor sequence |
| Structure | 10 20 30 40 50 UCUGUUGCAGAACCUGA--| U U A UC GCUG GUG GCAUCGUGG CA AUGCUCAGAC CUGUGGUG U CAU UGUGGCAUC GU UACGAGUUUG GGCACCAC U UCUGCCGUUACAUCGUUUU^ C - G UA GUAC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Cja-Mir-105-P2_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UCAAAUGCUCAGACUCCUGUGGUG -24
Get sequence
|
| Star sequence | Cja-Mir-105-P2_3p* (predicted) |
| mirBase accession | None |
| Sequence |
36- CCACGGAUGUUUGAGCAUGUGCU -59
Get sequence
|
