| MirGeneDB ID | Eca-Mir-105-P2 |
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| Family name |
MIR-105 (all species) |
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| Seed |
CAAAUGC |
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| Species |
Horse (Equus caballus) |
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| MiRBase ID |
eca-mir-105
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| Paralogues |
Eca-Mir-105-P1
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| Orthologues |
Bta-Mir-105-P2
Cfa-Mir-105-P2
Cja-Mir-105-P2
Hsa-Mir-105-P2
Mml-Mir-105-P2
Mmr-Mir-105-P2
Ocu-Mir-105-P2
Pab-Mir-105-P2
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_002863925.1_EquCab3.0) |
CM009179.1: 125118250-125118308 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GUUGCAAGACCUUCUGAGUGUGCAUCGUAGUCAAAUGCUCAGACUCCUGUGGUGGCCGUUCAUGCACCACGGAUGUUUGAGCAUGUGCUAUGGUGUCUACUUUUGCUACAUUGCCGUCU
Get precursor sequence
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| Structure | 10 20 30 40 50
GUUGCAAGACCUUCUGA--| U U A UC GCCG
GUG GCAUCGUAG CA AUGCUCAGAC CUGUGGUG U
CAU UGUGGUAUC GU UACGAGUUUG GGCACCAC U
UCUGCCGUUACAUCGUUUU^ C - G UA GUAC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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| Mature sequence |
Eca-Mir-105-P2_5p |
| mirBase accession | MIMAT0013193 |
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| Sequence |
0- UCAAAUGCUCAGACUCCUGUGGUG -24
Get sequence
|
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| Star sequence |
Eca-Mir-105-P2_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
36- CCACGGAUGUUUGAGCAUGUGCU -59
Get sequence
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