| MirGeneDB ID | Cja-Mir-185 |
|---|---|
| Family name | MIR-185 (all species) |
| Seed | GGAGAGA |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-185 Cfa-Mir-185 Cpo-Mir-185 Dno-Mir-185 Eca-Mir-185 Ete-Mir-185 Hsa-Mir-185 Laf-Mir-185 Mml-Mir-185 Mmr-Mir-185 Mmu-Mir-185 Ocu-Mir-185 Pab-Mir-185 Rno-Mir-185 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021915.1: 209262120-209262175 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UGGGCCUGGCUCGAGCAGGGGGCGAGGGAUUGGAGAGAAAGGCAGUUCCUGAUGGUCCCCUCCCCAGGGGCUGGCUUUCCUCUGGUCCUUCCCUCCCAAUGACCGCGUCUUCGUCGGet precursor sequence |
| Structure | 10 20 30 40 50 UGGGCCUGGCUCGAGCA--| C UG A G AUGGUC GGGGG GAGGGAU GAG GAAAG CAGUUCCUG \ CCCUC CUUCCUG CUC CUUUC GUCGGGGAC C GCUGCUUCUGCGCCAGUAA^ C GU - G CCCUCC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Cja-Mir-185_5p |
| mirBase accession | None |
| Sequence |
0- UGGAGAGAAAGGCAGUUCCUGA -22
Get sequence
|
| Star sequence | Cja-Mir-185_3p* |
| mirBase accession | None |
| Sequence |
35- AGGGGCUGGCUUUCCUCUGGU -56
Get sequence
|
