MirGeneDB 3.0

MirGeneDB ID

Cja-Mir-326

Family name MIR-326 (all species)
Seed CUCUGGG
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-326  Cfa-Mir-326  Cpo-Mir-326  Dno-Mir-326  Eca-Mir-326  Ete-Mir-326  Hsa-Mir-326  Laf-Mir-326  Mml-Mir-326  Mmr-Mir-326  Mmu-Mir-326  Ocu-Mir-326  Pab-Mir-326  Rno-Mir-326 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)
CM021925.1: 62331668-62331727 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUUCCAGAGCCUCAUCUGUCUGUUGGGCUGGAGGCAGGGCCUUUGUGAAGGCGGGUGGUGCUCAGAUCGCCUCUGGGCCCUUCCUCCAGCCCCGAGGCGGAUUCACCAUGAGGCUGACA
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Structure
        10        20           30        40          50        
UCUUCCAGAGCCUCAUCUG      ---          C       UU--|   AGGCGGGU 
                   UCUGUU   GGGCUGGAGG AGGGCCU    GUGA        G
                   AGGCGG   CCCGACCUCC UCCCGGG    CGCU        G
ACAGUCGGAGUACCACUU-      AGC          U       UCUC^   AGACUCGU 
.       110        100        90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
 +
To
Star sequence

Cja-Mir-326_5p* (predicted)

mirBase accessionNone
Sequence
0- GGAGGCAGGGCCUUUGUGAA -20
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Mature sequence

Cja-Mir-326_3p

mirBase accessionNone
Sequence
40- CCUCUGGGCCCUUCCUCCAG -60
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