MirGeneDB ID | Pab-Mir-326 |
Family name |
MIR-326 (all species) |
Seed |
CUCUGGG |
Species |
Sumatran orangutan (Pongo abelii) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-326
Cfa-Mir-326
Cja-Mir-326
Cpo-Mir-326
Dno-Mir-326
Eca-Mir-326
Ete-Mir-326
Hsa-Mir-326
Laf-Mir-326
Mml-Mir-326
Mmr-Mir-326
Mmu-Mir-326
Ocu-Mir-326
Rno-Mir-326
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054688.2: 77382721-77382780 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UCUUCCGGAGCCUCAUCUGUCUGUUGGGCUGGAGGCAGGGCCUUUGUGAAGGCGGGUGGUGCUCAGAUCGCCUCUGGGCCCUUCCUCCAGCCCCGAGGCGGAUUCACCAUGAGGCUGAUG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UCUUCCGGAGCCUCAUCUG ---| C UUGUGA GGUGGU
UCUGUU GGGCUGGAGG AGGGCCU AGGCG G
AGGCGG CCCGACCUCC UCCCGGG UCCGC C
GUAGUCGGAGUACCACUU- AGC^ U UC---- UAGACU
. 110 100 90 80 70 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Pab-Mir-326_5p* (predicted) |
mirBase accession | None |
Sequence |
0- GGAGGCAGGGCCUUUGUGAAGGCG -24
Get sequence
|
Mature sequence |
Pab-Mir-326_3p (predicted) |
mirBase accession | None |
Sequence |
40- CCUCUGGGCCCUUCCUCCAG -60
Get sequence
|