MirGeneDB 3.0

MirGeneDB ID

Ete-Mir-326

Family name MIR-326 (all species)
Seed CUCUGGG
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-326  Cfa-Mir-326  Cja-Mir-326  Cpo-Mir-326  Dno-Mir-326  Eca-Mir-326  Hsa-Mir-326  Laf-Mir-326  Mml-Mir-326  Mmr-Mir-326  Mmu-Mir-326  Ocu-Mir-326  Pab-Mir-326  Rno-Mir-326 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)
JH980327: 3977075-3977133 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GGGAGCCUCGUCCCUCCCGUCGGUUGGGCUGGAGGCAGGGCCUUUGUGAAGGCGGGUGGUGCUGGAUCGCCUCUGGGCCCUUCCUCCAGCCCAGAGGCGGAGUCACCGCGAGGGAGGCG
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Structure
        10           20        30        40        50        60 
GGGAGCCUCGUCCCUCC---|   GG            C       UUGUGA     GGUGGU 
                    CGUC  UUGGGCUGGAGG AGGGCCU      AGGCG      \
                    GCGG  GACCCGACCUCC UCCCGGG      UCCGC      G
GCGGAGGGAGCGCCACUGAG^   A-            U       UC----     UAGGUC 
       110       100         90        80            70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Ete-Mir-326_5p*

mirBase accessionNone
Sequence
0- GGAGGCAGGGCCUUUGUGAAGGCG -24
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Mature sequence

Ete-Mir-326_3p

mirBase accessionNone
Sequence
39- CCUCUGGGCCCUUCCUCCAG -59
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