MirGeneDB 3.0

MirGeneDB ID

Laf-Mir-326

Family name MIR-326 (all species)
Seed CUCUGGG
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-326  Cfa-Mir-326  Cja-Mir-326  Cpo-Mir-326  Dno-Mir-326  Eca-Mir-326  Ete-Mir-326  Hsa-Mir-326  Mml-Mir-326  Mmr-Mir-326  Mmu-Mir-326  Ocu-Mir-326  Pab-Mir-326  Rno-Mir-326 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)
GL010106.1: 2117064-2117123 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCCUCCGGAGCCUCAUCUGUCUGUUGGGCUGGAGGCAGGGCCUUUGUGAAGGCGUGUGGUGCUCGGAUCGCCUCUGGGCCCUUCCUCCAGCCCAGAGGCGGAUUCACCAUGAGGCUGAGG
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Structure
        10           20        30        40        50        60 
UCCUCCGGAGCCUCAUC---|    G            C       UUGUGA     UGUGGU 
                    UGUCU UUGGGCUGGAGG AGGGCCU      AGGCG      G
                    GCGGA GACCCGACCUCC UCCCGGG      UCCGC      C
GGAGUCGGAGUACCACUUAG^    -            U       UC----     UAGGCU 
.       110       100         90        80            70
Deep sequencing
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3' NTU Yes
MotifsUGUG in loop
Tissue expression
 +
Wh
Star sequence

Laf-Mir-326_5p*

mirBase accessionNone
Sequence
0- GGAGGCAGGGCCUUUGUGAAGGCG -24
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Mature sequence

Laf-Mir-326_3p

mirBase accessionNone
Sequence
40- CCUCUGGGCCCUUCCUCCAG -60
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