| MirGeneDB ID | Cja-Mir-491 |
|---|---|
| Family name | MIR-491 (all species) |
| Seed | GUGGGGA |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-491 Cfa-Mir-491 Cpo-Mir-491 Dno-Mir-491 Eca-Mir-491 Hsa-Mir-491 Mml-Mir-491 Mmr-Mir-491 Mmu-Mir-491 Ocu-Mir-491 Pab-Mir-491 Rno-Mir-491 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021915.1: 124474973-124475028 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UGCCUGCUGUGGGAAUUGACUUAGCUGGGUAGUGGGGAACCCUUCCAUGAGGAGUAGAACACUCCUUAUGCAAGAUUCCCUUCUACCUGGCUGGGUUGGAGUCAUAUCCUACAGGAGet precursor sequence |
| Structure | 10 20 30 40 50 UGCCUGCUGUGGGAAUU--| UG U CC C GUAG GACUUAGC GGUAG GGGGAA CUU CAUGAGGA \ UUGGGUCG CCAUC UCCCUU GAA GUAUUCCU A AGGACAUCCUAUACUGAGG^ GU U A- C CACA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UG at 5p(-14) |
| Mature sequence | Cja-Mir-491_5p |
| mirBase accession | None |
| Sequence |
0- AGUGGGGAACCCUUCCAUGAGGA -23
Get sequence
|
| Star sequence | Cja-Mir-491_3p* |
| mirBase accession | None |
| Sequence |
34- CUUAUGCAAGAUUCCCUUCUAC -56
Get sequence
|
