MirGeneDB 3.0

MirGeneDB ID

Ocu-Mir-491

Family name MIR-491 (all species)
Seed GUGGGGA
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-491
Paralogues
Orthologues Bta-Mir-491  Cfa-Mir-491  Cja-Mir-491  Cpo-Mir-491  Dno-Mir-491  Eca-Mir-491  Hsa-Mir-491  Mml-Mir-491  Mmr-Mir-491  Mmu-Mir-491  Pab-Mir-491  Rno-Mir-491 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)
chr1: 33144966-33145021 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCCUGCUGUGGGAAUUGACUUAGCUGGGUAGUGGGGAACCCUUCCAUGAGGAGUAGAACACUCCUUGUGCAAGAUUCCCUUCUACCUGACUGGGUUGGAGUCAUAUCCUACUCUG
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Structure
        10          20        30        40        50        
UGCCUGCUGUGGGAAUU--|      CU      U      CC   C  UG    GUAG 
                   GACUUAG  GGGUAG GGGGAA  CUU CA  AGGA    \
                   UUGGGUC  UCCAUC UCCCUU  GAA GU  UCCU    A
GUCUCAUCCUAUACUGAGG^      AG      U      A-   C  GU    CACA 
    110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
He Ki Te To Wh
Mature sequence

Ocu-Mir-491_5p

mirBase accessionMIMAT0048481
Sequence
0- AGUGGGGAACCCUUCCAUGAGGA -23
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Star sequence

Ocu-Mir-491_3p*

mirBase accessionMIMAT0048482
Sequence
34- CUUGUGCAAGAUUCCCUUCUAC -56
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