MirGeneDB ID | Pab-Mir-491 |
---|---|
Family name | MIR-491 (all species) |
Seed | GUGGGGA |
Species | Sumatran orangutan (Pongo abelii) |
MiRBase ID | |
Paralogues | |
Orthologues | Bta-Mir-491 Cfa-Mir-491 Cja-Mir-491 Cpo-Mir-491 Dno-Mir-491 Eca-Mir-491 Hsa-Mir-491 Mml-Mir-491 Mmr-Mir-491 Mmu-Mir-491 Ocu-Mir-491 Rno-Mir-491 |
Node of Origin (locus) | Eutheria |
Node of Origin (family) | Eutheria |
Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054692.2: 37449361-37449416 [-] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | UGUCUGCUGUGGGAAUUGACUUAGCUGGGUAGUGGGGAACCCUUCCAUGAGGAGUAGAACACUCCUUAUGCAAGAUUCCCUUCUACCUGGCUGGGUUGGAGUCAUAUCCUACAGGUGet precursor sequence |
Structure | 10 20 30 40 50 UGUCUGCUGUGGGAAUU--| UG U CC C GUAG GACUUAGC GGUAG GGGGAA CUU CAUGAGGA \ UUGGGUCG CCAUC UCCCUU GAA GUAUUCCU A UGGACAUCCUAUACUGAGG^ GU U A- C CACA 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | UG at 5p(-14) |
Mature sequence | Pab-Mir-491_5p |
mirBase accession | None |
Sequence |
0- AGUGGGGAACCCUUCCAUGAGGA -23
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|
Star sequence | Pab-Mir-491_3p* (predicted) |
mirBase accession | None |
Sequence |
34- CUUAUGCAAGAUUCCCUUCUAC -56
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|