MirGeneDB 3.0

MirGeneDB ID

Cpo-Mir-491

Family name MIR-491 (all species)
Seed GUGGGGA
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-491
Paralogues
Orthologues Bta-Mir-491  Cfa-Mir-491  Cja-Mir-491  Dno-Mir-491  Eca-Mir-491  Hsa-Mir-491  Mml-Mir-491  Mmr-Mir-491  Mmu-Mir-491  Ocu-Mir-491  Pab-Mir-491  Rno-Mir-491 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)
scaffold_21: 452989-453044 [-] UCSC
Precursor
(pre-Mir +30nt flank)
UGGCUGCUGUGGGCAUUGACUUAGCUGGGCAGUGGGGAACCCUUCCAUGAGGAGUAGAACACUCCUUAUGUAAGAUUCCCCUCUGCCUGGCUGGGUUGGAGUCAUAGCCUCCUCUG
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Structure
        10          20        30        40        50        
UGGCUGCUGUGGGCAUU--|       UG     U      CC   C        GUAG 
                   GACUUAGC  GGCAG GGGGAA  CUU CAUGAGGA    \
                   UUGGGUCG  CCGUC CCCCUU  GAA GUAUUCCU    A
GUCUCCUCCGAUACUGAGG^       GU     U      A-   U        CACA 
    110       100        90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
 +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Mature sequence

Cpo-Mir-491_5p

mirBase accessionMIMAT0047285
Sequence
0- AGUGGGGAACCCUUCCAUGAGGA -23
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Star sequence

Cpo-Mir-491_3p* (predicted)

mirBase accessionMIMAT0047286
Sequence
34- CUUAUGUAAGAUUCCCCUCUGC -56
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