| MirGeneDB ID | Eca-Mir-491 |
|---|
| Family name |
MIR-491 (all species) |
|---|
| Seed |
GUGGGGA |
|---|
| Species |
Horse (Equus caballus) |
|---|
| MiRBase ID |
eca-mir-491
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-491
Cfa-Mir-491
Cja-Mir-491
Cpo-Mir-491
Dno-Mir-491
Hsa-Mir-491
Mml-Mir-491
Mmr-Mir-491
Mmu-Mir-491
Ocu-Mir-491
Pab-Mir-491
Rno-Mir-491
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(GCA_002863925.1_EquCab3.0) |
CM009170.1: 39378601-39378656 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UGCCUGCUGUGGGAAUUGACUUAGCUGGGUAGUGGGGAACCCUUCCAUGAGGAGUAGAACACUCCUUAUGCAAGAUUCCCUUCUACCUGACUGGGUUGGAGUCAUAUCCUGUGCAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGCCUGCUGUGGGAAUU--| CU U CC C GUAG
GACUUAG GGGUAG GGGGAA CUU CAUGAGGA \
UUGGGUC UCCAUC UCCCUU GAA GUAUUCCU A
GACGUGUCCUAUACUGAGG^ AG U A- C CACA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14) |
|---|
Tissue expression
|
| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Eca-Mir-491_5p |
| mirBase accession | MIMAT0013116 |
|---|
| Sequence |
0- AGUGGGGAACCCUUCCAUGAGGA -23
Get sequence
|
|---|
| Star sequence |
Eca-Mir-491_3p* |
| mirBase accession | MIMAT0013117 |
|---|
| Sequence |
34- CUUAUGCAAGAUUCCCUUCUAC -56
Get sequence
|
|---|
