| MirGeneDB ID | Cpi-Mir-725 |
|---|
| Family name |
MIR-725 (all species) |
|---|
| Seed |
UCAGUCA |
|---|
| Species |
Western painted turtle (Chrysemys picta bellii) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Cmi-Mir-725
Dre-Mir-725
Gmo-Mir-725
Lch-Mir-725
Loc-Mir-725
Mal-Mir-725
Sto-Mir-725
Tni-Mir-725
Xla-Mir-725-P1
Xla-Mir-725-P2
Xtr-Mir-725
|
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| Node of Origin (locus) |
Gnathostomata
|
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| Node of Origin (family) |
Gnathostomata
|
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Genome context
(chrPic1) |
JH584849: 2587890-2587946 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UCUCUGGGAUCUGAGAUUGUGCAUCCACCUCACCUGAAACCGUGCCUGGAAUGACAUCAACCAAUUUCAGUCACUGUUUCUGGUGGAGUGGGUAGUCCACUGCGUCACCUACGACUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCUCUGGGAUCUGAGAU- UG -| CU U C C GACAU
UG C AUCCAC CACC GAAAC GUG CUGGAAU \
AC G UGGGUG GUGG CUUUG CAC GACUUUA C
UUCAGCAUCCACUGCGUC CU A^ AG U U U ACCAA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Cpi-Mir-725_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- CACCUGAAACCGUGCCUGGAAU -22
Get sequence
|
|---|
| Mature sequence |
Cpi-Mir-725_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
35- UUCAGUCACUGUUUCUGGUGGA -57
Get sequence
|
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