MirGeneDB ID | Mal-Mir-725 |
Family name |
MIR-725 (all species) |
Seed |
UCAGUCA |
Species |
Asian swamp eel (Monopterus albus) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Cmi-Mir-725
Cpi-Mir-725
Dre-Mir-725
Gmo-Mir-725
Lch-Mir-725
Loc-Mir-725
Sto-Mir-725
Tni-Mir-725
Xla-Mir-725-P1
Xla-Mir-725-P2
Xtr-Mir-725
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Gnathostomata
|
Genome context (GCA_001952655.1_M_albus_1.0_genomic) |
KV884719.1: 3843059-3843119 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GAAUCCCUUCACAACAGCUGUUACCCGCACAGCUAGAAACUUUGCCUGGGAAUUUCUGUGCUUAAAAAUUUCAGUCAUUGUUUCUGGUCGCGUGUGUAAUGUGGAAUCAAGACAAAACAGG
Get precursor sequence
|
Structure | 10 20 30 40 50
GAAUCCCUUCACAACAGCU--| C ACA UU C AAUUUCUGU
GUUAC CGC GCUAGAAAC UG CUGGG \
UAAUG GUG UGGUCUUUG AC GACUU G
GGACAAAACAGAACUAAGGUG^ U CGC UU U UAAAAAUUC
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Mal-Mir-725_5p* |
mirBase accession | None |
Sequence |
0- AGCUAGAAACUUUGCCUGGGAA -22
Get sequence
|
Mature sequence |
Mal-Mir-725_3p |
mirBase accession | None |
Sequence |
39- UUCAGUCAUUGUUUCUGGUCGC -61
Get sequence
|