MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-725-P1

Family name MIR-725 (all species)
Seed UCAGUCA
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-725-P2 
Orthologues Cmi-Mir-725  Cpi-Mir-725  Dre-Mir-725  Gmo-Mir-725  Lch-Mir-725  Loc-Mir-725  Mal-Mir-725  Sto-Mir-725  Tni-Mir-725  Xtr-Mir-725 
Node of Origin (locus) X. laevis
Node of Origin (family) Gnathostomata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030732.1: 101005302-101005357 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGCUACAUAUCUUCAGAGGGUUUUACGUUCCACUUGAAACUGUGCCUGUUGUGAAAAGCAGCAUUUCAGUCACGGUUUUUGGUGGAGUGUGAAUCUCUCAGCAACAGACCGAGAAG
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Structure
        10          20        30        40        50       
AGCUACAUAUCUUCAGA--|  U             U         C   UU  GAAA 
                   GGG UUUACGUUCCACU GAAACUGUG CUG  GU    A
                   CUC AAGUGUGAGGUGG UUUUGGCAC GAC  UA    G
GAAGAGCCAGACAACGACU^  U             U         U   UU  CGAC 
    110       100        90        80        70        60
Deep sequencing
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Em
Star sequence

Xla-Mir-725-P1_5p*
mirBase accessionNone
Sequence 
0- CACUUGAAACUGUGCCUGUUGU -22
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Mature sequence

Xla-Mir-725-P1_3p
mirBase accessionNone
Sequence 
34- UUCAGUCACGGUUUUUGGUGGA -56
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