MirGeneDB 3.0

MirGeneDB ID

Dgr-Mir-1996

Family name MIR-1996 (all species)
Seed UCAAGUG
Species Dimorphilus gyrociliatus (Dimorphilus gyrociliatus)
MiRBase ID
Paralogues
Orthologues Cte-Mir-1996  Cte-Mir-1996-as  Efe-Mir-1996-P1  Efe-Mir-1996-P2  Efe-Mir-1996-P3  Pdu-Mir-1996-o1  Pdu-Mir-1996-o2  Snu-Mir-1996 
Node of Origin (locus) Sipuncula + Pleistoannelida
Node of Origin (family) Sipuncula + Pleistoannelida
Genome context
(GCA_904063045.1_Dgyrociliatus)
CAJFCJ010000012.1: 1357814-1357873 [+]
Precursor
(pre-Mir +30nt flank)
UAAUUAUAAUAAAUUUAUAGAGCUUGGAGUAUCAAGUGAGGUCAGUGCUGUUGAGAAAUUCAGACAACGGCUUUGCUCUCUACUUGAAACUUCCAGUUCUUUCUUGCACUUAAACGCCUU
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Structure
        10          20        30         40        50         
UAAUUAUAAUAAAUUUAU--      U     A      -|  GU   U      GAGAAA 
                    AGAGCU GGAGU UCAAGU GAG  CAG GCUGUU      \
                    UCUUGA CUUCA AGUUCA CUC  GUU CGGCAA      U
UUCCGCAAAUUCACGUUCUU      C     A      U^  UC   U      CAGACU 
.       110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Mature sequence

Dgr-Mir-1996_5p (predicted)

mirBase accessionNone
Sequence
0- AUCAAGUGAGGUCAGUGCUGUU -22
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Star sequence

Dgr-Mir-1996_3p* (predicted)

mirBase accessionNone
Sequence
37- CGGCUUUGCUCUCUACUUGAAAC -60
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