MirGeneDB ID | Dgr-Mir-1996 |
---|---|
Family name | MIR-1996 (all species) |
Seed | UCAAGUG |
Species | Dimorphilus gyrociliatus (Dimorphilus gyrociliatus) |
MiRBase ID | |
Paralogues | |
Orthologues | Cte-Mir-1996 Cte-Mir-1996-as Efe-Mir-1996-P1 Efe-Mir-1996-P2 Efe-Mir-1996-P3 Pdu-Mir-1996-o1 Pdu-Mir-1996-o2 Snu-Mir-1996 |
Node of Origin (locus) | Sipuncula + Pleistoannelida |
Node of Origin (family) | Sipuncula + Pleistoannelida |
Genome context (GCA_904063045.1_Dgyrociliatus) |
CAJFCJ010000012.1: 1357814-1357873 [+] |
Precursor (pre-Mir +30nt flank) | UAAUUAUAAUAAAUUUAUAGAGCUUGGAGUAUCAAGUGAGGUCAGUGCUGUUGAGAAAUUCAGACAACGGCUUUGCUCUCUACUUGAAACUUCCAGUUCUUUCUUGCACUUAAACGCCUUGet precursor sequence |
Structure | 10 20 30 40 50 UAAUUAUAAUAAAUUUAU-- U A -| GU U GAGAAA AGAGCU GGAGU UCAAGU GAG CAG GCUGUU \ UCUUGA CUUCA AGUUCA CUC GUU CGGCAA U UUCCGCAAAUUCACGUUCUU C A U^ UC U CAGACU . 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | No |
Mature sequence | Dgr-Mir-1996_5p (predicted) |
mirBase accession | None |
Sequence |
0- AUCAAGUGAGGUCAGUGCUGUU -22
Get sequence
|
Star sequence | Dgr-Mir-1996_3p* (predicted) |
mirBase accession | None |
Sequence |
37- CGGCUUUGCUCUCUACUUGAAAC -60
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|