MirGeneDB 3.0

MirGeneDB ID

Dlo-Mir-965

Family name MIR-965 (all species)
Seed AAGCGUA
Species Braconid wasp (Diachasmimorpha longicaudata)
MiRBase ID
Paralogues
Orthologues Aae-Mir-965  Aga-Mir-965  Bge-Mir-965  Dan-Mir-965  Dma-Mir-965  Dme-Mir-965  Dmo-Mir-965  Dpu-Mir-965  Dsi-Mir-965  Dya-Mir-965  Gpa-Mir-965  Hme-Mir-965  Tca-Mir-965 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Pancrustacea
Genome context
(GCF_034640455.1_iyDiaLong2_genomic)
NC_087233.1: 6557938-6557998 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GUGAGCUGGAGGGAAAUGGUACAUUCUUGAGGGGAAAGGUUAUGACGAUUAUGAUAAUAUUUAAAACCAUAAGCGUAUAGCUUUUCCCCUUUGGCGUGUAUCGAAGGCAACGGUUUUUUCU
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Structure
        10          20        30        40        50        60
GUGAGCUGGAGGGAAAU--|      U  U                A  A     AUAAUA 
                   GGUACAU CU GAGGGGAAAGGUUAUG CG UUAUG      U
                   CUAUGUG GG UUCCCCUUUUCGAUAU GC AAUAC      U
UCUUUUUUGGCAACGGAAG^      C  U                -  G     CAAAAU 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Sr Sr
Star sequence

Dlo-Mir-965_5p*

mirBase accessionNone
Sequence
0- GGGGAAAGGUUAUGACGAUUAUG -23
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Mature sequence

Dlo-Mir-965_3p

mirBase accessionNone
Sequence
39- UAAGCGUAUAGCUUUUCCCCUU -61
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