MirGeneDB ID | Dlo-Mir-965 |
Family name |
MIR-965 (all species) |
Seed |
AAGCGUA |
Species |
Braconid wasp (Diachasmimorpha longicaudata) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Aae-Mir-965
Aga-Mir-965
Bge-Mir-965
Dan-Mir-965
Dma-Mir-965
Dme-Mir-965
Dmo-Mir-965
Dpu-Mir-965
Dsi-Mir-965
Dya-Mir-965
Gpa-Mir-965
Hme-Mir-965
Tca-Mir-965
|
Node of Origin (locus) |
Pancrustacea
|
Node of Origin (family) |
Pancrustacea
|
Genome context (GCF_034640455.1_iyDiaLong2_genomic) |
NC_087233.1: 6557938-6557998 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GUGAGCUGGAGGGAAAUGGUACAUUCUUGAGGGGAAAGGUUAUGACGAUUAUGAUAAUAUUUAAAACCAUAAGCGUAUAGCUUUUCCCCUUUGGCGUGUAUCGAAGGCAACGGUUUUUUCU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GUGAGCUGGAGGGAAAU--| U U A A AUAAUA
GGUACAU CU GAGGGGAAAGGUUAUG CG UUAUG U
CUAUGUG GG UUCCCCUUUUCGAUAU GC AAUAC U
UCUUUUUUGGCAACGGAAG^ C U - G CAAAAU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Dlo-Mir-965_5p* |
mirBase accession | None |
Sequence |
0- GGGGAAAGGUUAUGACGAUUAUG -23
Get sequence
|
Mature sequence |
Dlo-Mir-965_3p |
mirBase accession | None |
Sequence |
39- UAAGCGUAUAGCUUUUCCCCUU -61
Get sequence
|