MirGeneDB 3.0
MirGeneDB ID

Hme-Mir-965

Family name MIR-965 (all species)
Seed GGGAGAA
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID hme-mir-965
Paralogues
Orthologues Aae-Mir-965  Aga-Mir-965  Bge-Mir-965  Dan-Mir-965  Dlo-Mir-965  Dma-Mir-965  Dme-Mir-965  Dmo-Mir-965  Dpu-Mir-965  Dsi-Mir-965  Dya-Mir-965  Gpa-Mir-965  Tca-Mir-965 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Pancrustacea
Genome context
(Hmel_1)		 HE670498: 371732-371791 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAGAUGUCCAUUUUAUGCUGUAUAACUGAACGGGAGAAGUUAUAGCGCUGUAUGUUAUGUUAUAGCCAUAAGCGUAUAGCUUUUCCCCUUGGUUGUACAACAAAAUGCAUCACGAAGAGU
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Structure
        10           20        30        40        50        60
AAGAUGUCCAUUUUAUGC---|       UG AC             G    G    UUAUG 
                     UGUAUAAC  A  GGGAGAAGUUAUA CGCU UAUG     U
                     ACAUGUUG  U  CCCUUUUCGAUAU GCGA AUAC     U
UGAGAAGCACUACGUAAAACA^       GU C-             -    -    CGAUA 
.       110       100        90         80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Fe Fe Fe Fe Ma Ma
Mature sequence

Hme-Mir-965_5p
mirBase accessionNone
Sequence 
0- CGGGAGAAGUUAUAGCGCUGUAUG -24
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Co-mature sequence

Hme-Mir-965_3p
mirBase accessionMIMAT0024996
Sequence 
38- UAAGCGUAUAGCUUUUCCCCUU -60
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