MirGeneDB 3.0
MirGeneDB ID

Dsi-Mir-965

Family name MIR-965 (all species)
Seed AAGCGUA
Species Fruit fly (Drosophila simulans)
MiRBase ID dsi-mir-965
Paralogues
Orthologues Aae-Mir-965  Aga-Mir-965  Bge-Mir-965  Dan-Mir-965  Dlo-Mir-965  Dma-Mir-965  Dme-Mir-965  Dmo-Mir-965  Dpu-Mir-965  Dya-Mir-965  Gpa-Mir-965  Hme-Mir-965  Tca-Mir-965 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Pancrustacea
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)		 2L: 229196-229259 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAAUCUGGACAAAAUUGCUCAACAUUUUGGGGGGUGAAACUGUACGUUAUAUGUGCCCUUCUGUGAAAUUCAUAAGCGUAUAGCUUUUCCCCUUAAAAGUUAGAGCUACUGCAACGAAAAGUGG
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Structure
        10          20         30        40        50        60  
CAAUCUGGACAAAAUUG--   -|  A          U   A         A    UGCCCUUC 
                   CUC AAC UUUUGGGGGG GAA CUGUACGUU UAUG        \
                   GAG UUG AAAAUUCCCC UUU GAUAUGCGA AUAC        U
GGUGAAAAGCAACGUCAUC   A^  -          U   C         -    UUAAAGUG 
  120       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Wh
Star sequence

Dsi-Mir-965_5p*
mirBase accessionMIMAT0012471
Sequence 
0- GGGGUGAAACUGUACGUUAUAUG -23
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Mature sequence

Dsi-Mir-965_3p
mirBase accessionMIMAT0012472
Sequence 
42- UAAGCGUAUAGCUUUUCCCCUU -64
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